Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933080.1_cds_XP_016479480.1_71016
CDS Infomation

[gene=LOC107800768] [db_xref=GeneID:107800768] [protein=protein SUPPRESSOR OF GENE SILENCING 3-like] [protein_id=XP_016479480.1] [location=complement(join(5045..5252,5631..5788,6554..6798,6913..7207,7591..8592))] [gbkey=CDS]
Sequence

ATGAGTTCCAGCAAAGGGGTTGGGAAGTCGTCAGCAAAGCAGAAAGCTATCTGTGAAACA
ACTACACCAACGGTTGATGAGATAAGTCTAGGTGTTGGAGATATGGGCTTTAACTCTGAA
CAAAATGATGGATGGGAAGTGTATGCTAGGAAATCTAAGAACAAGAGTGGAAGCAGTGCT
GGGAAGCAATGGGTTCCTCAGAATCCCAGTCCGAAAACTTGGGGAAACCAGAATACCAAA
GCGTGGGGTCATCCAGATGTCGTTCAGAAATTGGGCATGCGTAACAATGTTGGACCAGGA
AGGGGTTCTAGGAATAACTGGTCTACACCTATTGATCCTCGAAAACCTGCTGGCAGAGAT
AACTCCAGGCCGCAGCTATTTGACGGAGGTTTTGGTAATTGCTACACCCCTTCACCTGCT
GCAGTTCCTCCTGCTCTGAAGAATGGATGGGATTGGTCTGCTAGAGCTGCCTCAACTGAT
CCGAAGGAGGACCAAGATGCTTCCCCTGTCGCTGATGATGTTCAGGGCAGTGAACATGAT
GGCGAGGATAATGAATCAGATTTTCTTGATGAAAGTGATGATGACCTTCGGAGTGATGAA
TTTGACTCAGATGTGGCTGAAATGAGTTATGAGACGCGCCAGAAAAATCGTTGGTTCAAA
GAACTTTTCGAATCTCTTGAAAGTTTTACTGTTACTGAGATTAATAATCCTGAACGACAG
TGGCACTGCCCTGCATGCAAAGGTGGTCCAGGTGCAATTGAGTGGTTTACAGGGTTGCAG
TCACTGATGACCCATGCAAAAACGAAAGGAGTAAGGGTTAAAATACACAGAGAACTTGCT
GAACTTTTGGAGGAAGAACTGCGTGAGAGAGGTACTTCTGTTGTACCTCCAGGTGAAGTG
TATGGAAAATGGGATGGCATAGAGTTTAAAGATAAAGAAATAGTGTGGCCACCAATGGTG
ATTATCATGAACACGAGGCATGACAAAGATGAAAATGACAAGTGGATTGGAATGGGAAAT
CAGGAGCTGCTTGAGTCTTTTAGCTCTTATGCTGCTGTCAAGGCTCGACATTCATATGGT
CCACAAGGCCATCGTGGCATGAGTGTATTGATTTTTGAGGCCTCTGCCGTGGGATACATT
GAGGCTGACCGTCTGCGTGAGCATTTTTCTGAAAATGGAAGAGACAGAGACGCATGGGAA
CGCGGTACAGCTCGCTTTTATTCAGGGGGGAAGCGTCTGCTTTATGGTTACATGGCAGAG
AAAAGAGACATAGACAGCTTTAACCAGCATTCACCTGGGAAATCAAAGTTGAAGTTCGAG
ATGAGGTCATACCAGGAAGCTGTTGGAAATCCAGCGAAGCAGATGATGGAGGATAATCAA
CAGCTAAACTGGTTCAAGAACAAAGCTGCTAAACACCAGAAGCAGGCTAAAGCTCTTGAA
GAGTCTCTCACTCTGGTGAGTGAAAAGCACCGTCAGACATTGGAAGAGAACAAGATTGTC
AGATTGAAAACAAAAATGCACCATGAACAAATCAAGGAAGAGATGGAGTACCAAGAACAG
TTTTTCAAGGATCAGATCAAAATAATTCATGATGCCAGGACTGCTGAGGAGGACAAATTT
GAAAAGGTACAACAGGAGCAGCGTGAGATGGTCCAACAATCTAATGCAAATACTTCCTCG
GTTGAGGATCATCGTGTGAGGGCAGAGCGTGTTGCAAAATTTATCAAACTTCAGGACAAG
GAAATGGAAGAGTTTGTGGAAGAGAGGGAGAATCTGATGAGAAGTCATGAAGATAGGATA
GCTGCATTGAGACGCAAATACTGGGAAGAGGAGGTTGAACTTGAGAAGAATTTTGACTTC
GAACTGGCTAAGCTCATGGAGAAGTACTCCCCAAAGCAATCTGAATAG

Peptide Sequence

PEP ID

XP_016479480.1
PEP Infomation

PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Nicotiana tabacum]
Sequence

MSSSKGVGKSSAKQKAICETTTPTVDEISLGVGDMGFNSEQNDGWEVYARKSKNKSGSSA
GKQWVPQNPSPKTWGNQNTKAWGHPDVVQKLGMRNNVGPGRGSRNNWSTPIDPRKPAGRD
NSRPQLFDGGFGNCYTPSPAAVPPALKNGWDWSARAASTDPKEDQDASPVADDVQGSEHD
GEDNESDFLDESDDDLRSDEFDSDVAEMSYETRQKNRWFKELFESLESFTVTEINNPERQ
WHCPACKGGPGAIEWFTGLQSLMTHAKTKGVRVKIHRELAELLEEELRERGTSVVPPGEV
YGKWDGIEFKDKEIVWPPMVIIMNTRHDKDENDKWIGMGNQELLESFSSYAAVKARHSYG
PQGHRGMSVLIFEASAVGYIEADRLREHFSENGRDRDAWERGTARFYSGGKRLLYGYMAE
KRDIDSFNQHSPGKSKLKFEMRSYQEAVGNPAKQMMEDNQQLNWFKNKAAKHQKQAKALE
ESLTLVSEKHRQTLEENKIVRLKTKMHHEQIKEEMEYQEQFFKDQIKIIHDARTAEEDKF
EKVQQEQREMVQQSNANTSSVEDHRVRAERVAKFIKLQDKEMEEFVEERENLMRSHEDRI
AALRRKYWEEEVELEKNFDFELAKLMEKYSPKQSE

Transcript Sequence

Gene sequence data has not been registered.